Transposon studies on colchium chalcedonicum

dc.authoridElif Karlık / 0000-0003-0669-2725en_US
dc.authoridNermin Gözükırmızı / 0000-0002-7129-3045en_US
dc.authorscopusidNermin Gözükırmızı / 6701520637
dc.authorscopusidElif Karlık / 56926577900
dc.authorwosidNermin Gözükırmızı / M-1419-2013
dc.authorwosidElif Karlık / N-6348-2018
dc.contributor.authorKarlık, Elif
dc.contributor.authorAlbayrak, Merve
dc.contributor.authorÜzen, Erdal
dc.contributor.authorGözükırmızı, Nermin
dc.date.accessioned2021-02-02T10:47:59Z
dc.date.available2021-02-02T10:47:59Z
dc.date.issued2019en_US
dc.departmentİstinye Üniversitesi, Mühendislik ve Doğa Bilimleri Fakültesi, Moleküler Biyoloji ve Genetik Bölümüen_US
dc.description.abstractColchicum chalcedonicum is one of the endemic plants in Turkey. The aim of this study was the investigation of the retrotransposon SIRE1, Sukkula and Nikita presence and insertion patterns in C. chalcedonicum. The plant samples were collected from the botanic garden of the Istanbul University. DNA isolation was performed from leaves by using modified CTAB/SEVAG protocol. Retrotransposon movements were investigated using SIRE1, Sukkula and Nikita primers by Inter Retrotranposon Amplified Polymorphism PCR technique (IRAP-PCR). Polymorphism percentages (%) were calculated based on Jaccard Similarity Index. We observed that polymorphism ratios of SIRE1, Sukkula and Nikita retrotransposons among all samples were 0-40%, 0- 100% and 0-60%, respectively. This is the first report to demonstrate three barley ? SIRE1, Sukkula and Nikita? retrotransposons presence and movements in C. chalcedonicum which is belonged to Colchium family, thus these IRAP primers may be used in further characterization and diversity studies of Colchicum family.en_US
dc.identifier.citationKarlik, E., Albayrak, M., Erdal, U. Z. E. N., & GÖZÜKIRMIZI, N. (2019). Transposon studies on Colchium chalcedonicum. International Journal of Life Sciences and Biotechnology, 2(1), 25-35.en_US
dc.identifier.doi10.38001/ijlsb.529237en_US
dc.identifier.endpage35en_US
dc.identifier.issn2651-4621en_US
dc.identifier.issue1en_US
dc.identifier.startpage25en_US
dc.identifier.urihttps://doi.org/10.38001/ijlsb.529237
dc.identifier.urihttps://hdl.handle.net/20.500.12713/1402
dc.identifier.volume2en_US
dc.institutionauthorKarlık, Elif
dc.institutionauthorGözükırmızı, Nermin
dc.language.isoenen_US
dc.publisherDergiParken_US
dc.relation.ispartofInternational Journal of Life Sciences and Biotechnologyen_US
dc.relation.publicationcategoryMakale - Ulusal Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectColchicum Chalcedonicumen_US
dc.subjectRetrotransposonsen_US
dc.subjectSIRE1en_US
dc.subjectSukkulaen_US
dc.subjectNikitaen_US
dc.titleTransposon studies on colchium chalcedonicumen_US
dc.typeArticleen_US

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